BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G04SP1|AL426089
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig420 1563 0.0
3x_Contig1027 168 2e-41
3x_Contig1362 150 4e-36
3x_Contig1590 148 2e-35
3x_Contig356 146 7e-35
3x_Contig450 120 4e-27
>3x_Contig420
Length = 1461
Score = 1563 bits (781), Expect = 0.0
Identities = 827/852 (97%)
Strand = Plus / Minus
Query: 1 aagtgatccaaagggattcaccactttgttgatcgaraacatcgtgctagtattgtgaga 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1348 aagtgatccaaagggattcaccactttgttgatcgaaaacatcgtgctagtattgtgaga 1289
Query: 61 cctcgagatagggctattaaatatcgataatagtagatatccagtagattcattgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 cctcgagatagggctattaaatatcgataatagtagatatccagtagattcattgaatat 1229
Query: 121 ccaaatcatctccagtwatttcttgtaagttaaccatattcattctaaaanvttttcgaa 180
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1228 ccaaatcatctccagtaatttcttgtaagttaaccatattcattctaaaaaattttcgaa 1169
Query: 181 attaggtattcgggtaaccttttaamatgctgagattcgctaggacacagagggagcttg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1168 attaggtattcgggtaaccttttaaaatgctgagattcgctaggacacagagggagcttg 1109
Query: 241 gagacgataagagggtatgcbatgctgatgtragtgtttagatgcgcctagcagattgac 300
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 1108 gagacgataagagggtatgcaatgctgatgtaagtgtttagatgcgcctagcagattgac 1049
Query: 301 aaattgaaacagccgaaactatttcagttaacctactattattttrgcatcacgtttttc 360
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 1048 aaattgaaacagccgaaactatttcagtaaacctactattattttagcatcacgtttttc 989
Query: 361 aaaaatgtagctgtvacattataaactgcgtattcctcagttcaaaataggttaggtcca 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 aaaaatgtagctgtaacattataaactgcgtattcctcagttcaaaataggttaggtcca 929
Query: 421 ccagaaaagaattggtagcaggcaataatctcgtaggagtatatagtggtaaattctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ccagaaaagaattggtagcaggcaataatctcgtaggagtatatagtggtaaattctttt 869
Query: 481 tatgacaagaaacagcttctatggccaagttggtaaggcgccacactagtgatgtggaga 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 868 tatgacaagaaacagcttctatggccaagttggtaaggcgccacactagtaatgtggaga 809
Query: 541 tcatcagttcgactctggttggragcatttttttgggtcccttaaacmattaccctagat 600
|||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||
Sbjct: 808 tcatcagttcgactctggttggaagcatttttttggatcccttaaacaattaccctagat 749
Query: 601 gagaatgtagcacaataattcccgncagtcaacatgncnnttanccattntvaagatacc 660
|| ||||||||||||||||||||| |||| |||||| | ||| ||||| | ||||||||
Sbjct: 748 gaaaatgtagcacaataattcccgacagtaaacatgacaattaaccattataaagatacc 689
Query: 661 ttgaagtaaaatgtgaagagattaaatgagtattataacgttatatatgtacatatgtka 720
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 688 ttgaagtaaaatgtgaagaaattaaatgagtattataacgttatatatgtacatatgtga 629
Query: 721 aagcccaacttatcagtataacataaatcgtttcgatatattttgtgacttgtcttgttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aagcccaacttatcagtataacataaatcgtttcgatatattttgtgacttgtcttgttt 569
Query: 781 atagtgttagacaattaactgatcctcagttgatagttttcattaggggtatcaagtatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atagtgttagacaattaactgatcctcagttgatagttttcattaggggtatcaagtatc 509
Query: 841 agtagtgagtat 852
||||||||||||
Sbjct: 508 agtagtgagtat 497
>3x_Contig1027
Length = 4522
Score = 168 bits (84), Expect = 2e-41
Identities = 97/102 (95%)
Strand = Plus / Minus
Query: 474 ttctttttatgacaagaaacagcttctatggccaagttggtaaggcgccacactagtgat 533
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2567 ttctttttatgacaacaataagcttctatggccaagttggtaaggcgccacactagtaat 2508
Query: 534 gtggagatcatcagttcgactctggttggragcatttttttg 575
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2507 gtggagatcatcagttcgactctggttggaagcatttttttg 2466
>3x_Contig1362
Length = 8864
Score = 150 bits (75), Expect = 4e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 491 aacagcttctatggccaagttggtaaggcgccacactagtgatgtggagatcatcagttc 550
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8289 aacagcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttc 8348
Query: 551 gactctggttggragcatttt 571
|||||||||||| ||||||||
Sbjct: 8349 gactctggttggaagcatttt 8369
>3x_Contig1590
Length = 13653
Score = 148 bits (74), Expect = 2e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 491 aacagcttctatggccaagttggtaaggcgccacactagtgatgtggagatcatcagttc 550
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9451 aacagcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttc 9510
Query: 551 gactctggttggragcattttttt 574
|||||||||||| |||||| ||||
Sbjct: 9511 gactctggttggaagcattatttt 9534
>3x_Contig356
Length = 1664
Score = 146 bits (73), Expect = 7e-35
Identities = 80/83 (96%)
Strand = Plus / Minus
Query: 491 aacagcttctatggccaagttggtaaggcgccacactagtgatgtggagatcatcagttc 550
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 387 aacagcttctatggccaagttggtaaggcgccacactagtaatgtggagatcatcagttc 328
Query: 551 gactctggttggragcatttttt 573
|||||||||||| ||||| ||||
Sbjct: 327 gactctggttggaagcatatttt 305
>3x_Contig450
Length = 1374
Score = 120 bits (60), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 501 atggccaagttggtaaggcgccacactagtgatgtggagatcatcagttcgactctggtt 560
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 1 atggccaagttggtaaggcgccatactagtaatgtggagatcatcagttcgactctggtt 60
Query: 561 ggragcattttttt 574
|| |||| ||||||
Sbjct: 61 ggaagcaatttttt 74
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5107
Number of Sequences: 1807
Number of extensions: 5107
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 6
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)